PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07403.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 387aa    MW: 42864.6 Da    PI: 9.9806
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07403.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12315360655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  s ae+L +A +YIk+Lq
  KHN07403.1 315 SIAERVRRTRISERIRKLQELVPTM----DKQTSTAEMLDLALDYIKDLQ 360
                 689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.199309359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-16312376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-11313362No hitNo description
Gene3DG3DSA:4.10.280.106.5E-14314372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-9315360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-11315365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MDSNSRYHVQ QQHQQPNSGL LRFRSAPTAN FKQQGEVAAN TNGNAWEGSE PFLRFLNSGD  60
THDTTSSPTL REFVDNKVSN NSKPAKESSA SSPLSRMNSQ QGYSASMLPS RSTVTSAMML  120
GSMGIDQSAK SFDSNSLRQS SFPAGHFSNN ISFQNGYDAM KGVGNYSGVN GNDGELSLSM  180
NRMKNHISFS SISPSSSLGM LSPTSKMGTE GIRVTRPEDG RQGSCNGDAR YYGPGFPYAS  240
WNEPSHPKRQ RSSNDELLFD SQNGEPGNQV QRLSHHLSLP RTSSEMFAMD NLLQFSDSVP  300
CKIRAKRGFA THPRSIAERV RRTRISERIR KLQELVPTMD KQTSTAEMLD LALDYIKDLQ  360
KQFKTLSDKR AKCKCINMQK SEADRVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006576847.10.0PREDICTED: transcription factor bHLH130-like
RefseqXP_006576846.10.0PREDICTED: transcription factor bHLH130-like
RefseqXP_006576845.10.0PREDICTED: transcription factor bHLH130-like
RefseqXP_003521194.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A0B2PIH90.0A0A0B2PIH9_GLYSO; Transcription factor bHLH130
TrEMBLI1JNH20.0I1JNH2_SOYBN; Uncharacterized protein
STRINGGLYMA03G29750.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51773253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-62bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]